I belive it picks it up from the starbound.config file, I didn't change any of that part really, so it should be working as the dev / old version. I know i had to change my server's default_spawn location... i'll have a look.
Also, there's fairly fresh development branch on official repo, its actually those modifications i used and applied on the previous version along with my modifications. I also added the plugins I use, because this way I can maintain stuff much easier. know its a mess looking at commits. But I did try to comment each one. Also tried to make it as fast as possible by removing all debugs and traces.
Yup but what gets me confuse is how this wrapper could have one more solid base in the way it works, like Starrybound, that makes it much easier for both players and specially owners, some things here i got lost like how to work with permissions, special settings, etc...etc.. Everything outside the config file, evil pyton D:
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